Insertion junction: CLIP2.057957_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057957
Chromosome:chromosome 3
Location:2658035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160700 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCATGCAAGGTAGCTTGAAGCGACCTTAAGCCTGGCCGACTTGGACTC
Internal bar code:AGAGAGGCTGTTAGGTGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1596
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGCTGCAGACTGGAGAT
Suggested primer 2:CGGCGCTCTAGTAAGGAAGG