Insertion junction: CLIP2.057957_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057957
Chromosome:chromosome 3
Location:2658045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160700 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTCACGTGCGGTTGATCCAGGGTTGGTCACTGCTGTCTCGATCCACC
Internal bar code:AGAGAGGCTGTTAGGTGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4812
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGCTCTAGTAAGGAAGG
Suggested primer 2:TAGGGCTGCAGACTGGAGAT