Insertion junction: CLIP2.057960_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057960
Chromosome:chromosome 5
Location:3047391
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g232004 (1 of 1) IPR012677//IPR014720 - Nucleotide-binding alpha-beta plait domain // Double-stranded RNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTACTTCACTACTCATGGATGTAGCCCCCATCATTCAGTAACGACT
Internal bar code:AGAATAGAGTGCATCGAACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCTCCACCACTTCCAC
Suggested primer 2:CGGTCTTCAAGCCTTCAGGT