Insertion junction: CLIP2.057965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057965
Chromosome:chromosome 11
Location:942211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467658 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA
Cre11.g467659 (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTAACATATGACCGCACGCACGAAGTCAACCTCTTGCTTTCACCCCT
Internal bar code:TCAGACTTAAAAGGGTGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCACAGGAATGGGGTG
Suggested primer 2:CTTTGTGACAGCAGCAGCAG