Insertion junction: CLIP2.057980_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057980
Chromosome:chromosome 4
Location:1661788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212650 (1 of 1) PTHR21231//PTHR21231:SF7 - XPA-BINDING PROTEIN 1-RELATED // GPN-LOOP GTPASE 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGGCCCCTCATGGGCCCCTCATGGGCGCCTCATGGGCCCTCATGGGG
Internal bar code:TCTCCGGTACGGTTCCAGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGTTCAGCCTGGTGTC
Suggested primer 2:TGAGCCTCTGTTGTCAGCTG