Insertion junction: CLIP2.058001_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058001
Chromosome:chromosome 12
Location:6153908
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g535500 (1 of 103) IPR000504 - RNA recognition motif domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCGCCACCCATGCAGACCCCGGCTTTGCGGCCCCCGCTGCCCCGCGT
Internal bar code:CGAGTGCCTTTTTGTACTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTAGGGGGCTTGGCAGA
Suggested primer 2:ATTGGATGACACCAGGCTGG