Insertion junction: CLIP2.058006_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058006
Chromosome:chromosome 6
Location:1447439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260050 (1 of 27) IPR015947 - PUA-like domain 3'UTR
Cre06.g260100 UAA3 UDP-galactose transporter; (1 of 2) K15276 - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 (SLC35B2, PAPST1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATTGTTCAGCTCATGGACACAGATGGAGAGGCCATGAATGTCCGTT
Internal bar code:AGATCCCCGGACCTAAAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCATGTTCCCCGATGC
Suggested primer 2:CAGCAGCAGGAGAAGGTTCA