Insertion junction: CLIP2.058028_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058028
Chromosome:chromosome 3
Location:8539272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211297 5'UTR
Cre03.g211409 PPR15,mS106,MRPS106 Mitochondrial ribosomal protein S106, Chlamydomonas specific 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGCCATTCCCATCGCCGCACCCGTCTAGGGGTTCTGCCCATCTACG
Internal bar code:GCGATGAAGTATTGTACCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCTTTCAAGGAGCGGGG
Suggested primer 2:TTGACGCCCTTCCTGGTTAC