Insertion junction: CLIP2.058031_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058031
Chromosome:chromosome 16
Location:5382817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683100 (1 of 239) IPR016024 - Armadillo-type fold outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACAATTAACTGCACCGGTGCCTGCGGTGCTGATCCAATCACCAGGGC
Internal bar code:GAGACTTGGGCTGTACTGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAGCAATGGTGGATCCC
Suggested primer 2:CCAGCCTGACAACCAATCCT