Insertion junction: CLIP2.058038_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058038
Chromosome:chromosome 3
Location:5973623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189250 RAB11,RABA1 Small Rab-related GTPase; (1 of 1) K07904 - Ras-related protein Rab-11A (RAB11A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCTAGCTAAGTTTGCAGGGGCGCAGTAGTAGCTAAGACATAAAATA
Internal bar code:GAAATATATAAGCGCCTCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2332
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGTGCACGAACGATTT
Suggested primer 2:TGCAGTGTCCCAAATTTGCG