Insertion junction: CLIP2.058047_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058047
Chromosome:chromosome 13
Location:1904373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575800 IGS1 Indole-3-glycerol-phosphate synthase; (1 of 2) 4.1.1.48 - Indole-3-glycerol-phosphate synthase / Indoleglycerol phosphate synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGGATTTTGTTTCACCTGTACAGCATAGTTTGTGATAACTGCTGCCA
Internal bar code:CGGTGCGAATTTGAGTTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTCTCCGCAATGAGTGT
Suggested primer 2:TCGCTCACCTTGAAGTCCAC