Insertion junction: CLIP2.058048_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058048
Chromosome:chromosome 3
Location:4119322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172600 (1 of 1) IPR000104//IPR001841//IPR011990//IPR013083 - Antifreeze protein, type I // Zinc finger, RING-type // Tetratricopeptide-like helical domain // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGTATTGCACAAGTATACTGGAGCAGCCGGCGCAGCCTGCCTGCAT
Internal bar code:GGGAGTCTTTCTGACGCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATATGGCGCTGAGGGA
Suggested primer 2:GCAGGAAACCTTGTTGCAGG