Insertion junction: CLIP2.058057_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058057
Chromosome:chromosome 6
Location:5164165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTGATTGGTCGTCCTCGTACGCGCCCCCCTCCACCTCCAAGTCAGAG
Internal bar code:GCACTGAAGGAATTGCTGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2792
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTCTCCTGTTTCGGCAT
Suggested primer 2:AACCGTGTCGTCACTGTCTC