Insertion junction: CLIP2.058063_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058063
Chromosome:chromosome 1
Location:4216340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028450 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGGGCCGTGGGGCAGTGCAGCCCTGTGTCTAGGGAGGAGCTAAGATT
Internal bar code:TATTGTATCGTCTGGGTAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:94.0299
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAAGTTGCAGCCCATAT
Suggested primer 2:TGTGGACATTCAGGGATGGC