Insertion junction: CLIP2.058067_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058067
Chromosome:chromosome 15
Location:5319574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g734516 RPN9 (1 of 1) K03039 - 26S proteasome regulatory subunit N9 (PSMD13, RPN9); 26S proteasome regulatory subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTTACACCCTTCGACCCTCCGCTACTCCTTCGGGGCATCACCCCCC
Internal bar code:TGATACCTTATCATGGCGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3599
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTTCGATAGCTCGCTCG
Suggested primer 2:TCGTGTTGGTCAGGCTACAC