Insertion junction: CLIP2.058069_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058069
Chromosome:chromosome 7
Location:4495572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343600 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACTGGCGATCCACCGGGTCACCTGCGCAAGGTAGGCGGTGGCGAGC
Internal bar code:CGAAAGTAAAACCCACTAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:8679
LEAP-Seq percent confirming:76.3441
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGTTCCTGCAACAAAG
Suggested primer 2:TAGGTACAGGACTGGGAGGC