Insertion junction: CLIP2.058080_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058080
Chromosome:chromosome 6
Location:5702043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288100 (1 of 1) PTHR12829//PTHR12829:SF1 - N6-ADENOSINE-METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR
Cre06.g288150 (1 of 1) PTHR23023//PTHR23023:SF119 - DIMETHYLANILINE MONOOXYGENASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAGTCCTTGCGCCTTCGGTTGCAGGCCTTCAGCGCCAGTCCTTGCGC
Internal bar code:GTATGGTTTGAATTGACAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2399
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGAGAGATTAGACGCC
Suggested primer 2:TCGAAGCTTAGCGGTTTGGT