Insertion junction: CLIP2.058081_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058081
Chromosome:chromosome 9
Location:849447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403650 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGCGTTTGTATGCGCTCGTGACACACGATAGGCGAGGGCAATCGTAA
Internal bar code:AATCGTGGTCCCTACTGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1028
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGCGCACGGCTTAAAGG
Suggested primer 2:AACTCGGTCTTCAGCATGGG