Insertion junction: CLIP2.058082_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058082
Chromosome:chromosome 1
Location:3482108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCAGAAATGACACGGTCAATCAGGGAAGCTCTCCCAGCCAAGTGGAA
Internal bar code:TTGCGGCCGTGAGCGAGCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:6179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGCCACCACGCTTCTCA
Suggested primer 2:TTCCGGAACCTACCCAATGC