Insertion junction: CLIP2.058083_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058083
Chromosome:chromosome 8
Location:342598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358573 MLO3 transient receptor potential ion channel protein; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGCCCAAGGCACTGGGTGCCGCACCGCCAGACACCGCCTGACAGCAT
Internal bar code:AGTACTACAAACTGTTCTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:81.5789
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGGGTGATAAGATAGGC
Suggested primer 2:CCCAGGCTGTTGAAAGAGGT