Insertion junction: CLIP2.058086_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058086
Chromosome:chromosome 3
Location:8623028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210177 (1 of 3) PF13405//PF13499 - EF-hand domain (EF-hand_6) // EF-hand domain pair (EF-hand_7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTACACTGGAACCATGTAAAATAAGAAGTGCTCATTCCGCTTTCCGC
Internal bar code:GATAGGTCGTTTCTGTTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2704
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTGCAGTCCGTGGTTGC
Suggested primer 2:GGTATCTGCTTCGGTAGGCC