Insertion junction: CLIP2.058090_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058090
Chromosome:chromosome 9
Location:681975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404550 (1 of 2) 2.7.11.20 - [Elongation factor 2] kinase / EF2K 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTGCACGAATCCGTGGCATTGCGAGGCGTTTGTTCCTGACCGTCGCA
Internal bar code:TGAAGGTTTCCCGAGGCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACCCCTTTGCTCCTCG
Suggested primer 2:TACTAGCAGCCACCTCGACT