Insertion junction: CLIP2.058090_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058090
Chromosome:chromosome 9
Location:681976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404550 (1 of 2) 2.7.11.20 - [Elongation factor 2] kinase / EF2K 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGCGTGTTGCCCGTCGCAGCCAGGAGGGGTGCCCTTGTCACCTGCC
Internal bar code:TGAAGGTTTCCCGAGGCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2543
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TACTAGCAGCCACCTCGACT
Suggested primer 2:ATGAACCCCTTTGCTCCTCG