Insertion junction: CLIP2.058098_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058098
Chromosome:chromosome 17
Location:1597451
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g707400 (1 of 1) PF00013//PF13014 - KH domain (KH_1) // KH domain (KH_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGATAGCGGGCTCAAGAAAGCGCCCGCTGCGAGCAGGTAGGCGCAG
Internal bar code:CGTTAGGACACGGTATGTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGCTGCGCTCTGTTTTC
Suggested primer 2:GTGCTCATCGAGAGGAGTCG