Insertion junction: CLIP2.058100_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058100
Chromosome:chromosome 4
Location:2959331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224850 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCGTGCGTACGTGCTTGCGCGATCGGTATCAGGAGGCAGCTGACGTG
Internal bar code:TACAGCAAGTATTTATCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1685
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCACCGCAGTTGGACC
Suggested primer 2:CGTGTTGTCTGCGTGTTTGT