Insertion junction: CLIP2.058106_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058106
Chromosome:chromosome 2
Location:1348785
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g082825 TSS1,SERRS1 Seryl tRNA(Sec) synthetase; (1 of 1) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCTCATGCCTCCCCTCCCCTCCGTGCCAACCCCCCCCCCGCACCTG
Internal bar code:CCATGTCGATGGACGGGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:743
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCCTTCTCCTTGCCTAC
Suggested primer 2:GATTCAAGGGGTGGGGTGAG