Insertion junction: CLIP2.058107_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058107
Chromosome:chromosome 6
Location:6610604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294650 AGT1 Alanine-glyoxylate transaminase; (1 of 2) K00830 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase (AGXT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTCAGGCCTTCCTCCCACACTCTCCCCCACCGGGCCTGGACGTCCCG
Internal bar code:TTTCCATGGTCATCGGGATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1650
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTGAGGACAGAGCCTG
Suggested primer 2:CGGGATAGCGAGCTTAGCAA