Insertion junction: CLIP2.058109_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058109
Chromosome:chromosome 17
Location:6788355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746747 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGCGGTCGTGTCCTCAGCTATGAAGCCTTCGGGCACCACGCGCGCG
Internal bar code:CGTGAGAGTGATAGTACTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAGTGAACACCCAAACA
Suggested primer 2:TGGGGTCTGGCACTTTGTTT