Insertion junction: CLIP2.058111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058111
Chromosome:chromosome 7
Location:4673816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTCAGGTGGCATCCGTTCACATTGAGCTGGTGCTAGGTCAGTGACGT
Internal bar code:CGCGGATCTTATTAAGGCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACGGGTAAGCGTCCAGA
Suggested primer 2:CTCAGTAGCGGCCCATGTAG