Insertion junction: CLIP2.058114_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058114
Chromosome:chromosome 12
Location:9655708
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g558353 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTAGGGAGGAGCGGGGGCGTGGTTAGAAAGTGGGTGGAAACAGATAA
Internal bar code:GGGGCAGTCGAGGATCCAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:108
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGCCATCATCGTGATA
Suggested primer 2:CCCCCACCTGTCTCATCAAC