Insertion junction: CLIP2.058121_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058121
Chromosome:chromosome 10
Location:6538981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465450 (1 of 2) 2.8.2.20 - Protein-tyrosine sulfotransferase / Tyrosylprotein sulfotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCACGGGCGACCATTCGGCCTGACCCCGCGATGCACCTGTATGCGTC
Internal bar code:GTCCCATCAGGTTTTGGCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2637
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTCTCTTAAGCCCGCGT
Suggested primer 2:GTGTTGTGGCAAGCAGTGAG