Insertion junction: CLIP2.058125_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058125
Chromosome:chromosome 1
Location:2208899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012350 (1 of 1) K02331 - DNA polymerase phi [EC:2.7.7.7] (POL5, MYBBP1A) 3'UTR
Cre01.g012400 (1 of 4) PTHR22911//PTHR22911:SF6 - ACYL-MALONYL CONDENSING ENZYME-RELATED // SOLUTE CARRIER FAMILY 35 MEMBER G1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAATGAGAGCTCCATGGGTGTCAAGAAGAGATCTAGTTACAACGCCT
Internal bar code:CGTGATAGGGATCTACGGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGACGAGGAGGAGAAGC
Suggested primer 2:GGCGGGTTAGGTCTGATACG