Insertion junction: CLIP2.058135_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058135
Chromosome:chromosome 3
Location:713224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145887 TAT3,TATC,TATC1 (1 of 1) K03118 - sec-independent protein translocase protein TatC (tatC); TatC-like sec-independent protein translocon subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCATGTGAAGCGGGCAAATGTAGGGGTGCGGCCTGGGGCTAGGTGGT
Internal bar code:GCCATAAGGCTGGTCGCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTGATGTGGTTTGTGT
Suggested primer 2:ACACACACACACACACACCT