Insertion junction: CLIP2.058144_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058144
Chromosome:chromosome 10
Location:5507881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAACCACGCGGGAAATATGGTATGTTGCGCCCATAGCCGCTAATCGC
Internal bar code:CGTTATCACCCAGTATTGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2236
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGACGTGCAGGAACTC
Suggested primer 2:GGTACTTGTCAGGTGGGCTC