Insertion junction: CLIP2.058151_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058151
Chromosome:chromosome 2
Location:3970977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102551 CSV1 Chlamydomonas-specific family protein 3'UTR
Cre02.g102600 (1 of 1) PTHR23012:SF92 - RING/U-BOX DOMAIN-CONTAINING PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGTGCGTAGCGTCCATCGACGCACTGTTCGGTTAGATGCCGGAACA
Internal bar code:GCTCAGAGCTTGTGGGGGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:45.8333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGTCGTATGTTTGGCC
Suggested primer 2:ATTGGAAGCGTTTTGGCACC