Insertion junction: CLIP2.058154_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058154
Chromosome:chromosome 6
Location:3504942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278116 (1 of 1) IPR008136 - CinA, C-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTAGATCCTCGCCTTCTCGTCAAGCGCGTGCCCCCACCTCCCAGTCTG
Internal bar code:TTGTTATGTGAACACCATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGCTGTGCAAAACCTTG
Suggested primer 2:TTCATCGGGAAAGAAGGGGC