Insertion junction: CLIP2.058156_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058156
Chromosome:chromosome 8
Location:214766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358555 (1 of 2) PTHR10625//PTHR10625:SF131 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGGCTTACAAGGCTAAGATTTTGCGCAAATTTATTGGGGGAGGCGGG
Internal bar code:GTATTGTCACATGTCAAGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGAGGTGAAGGCAAAC
Suggested primer 2:CACAGTGTCCGGGATTTCCA