Insertion junction: CLIP2.058156_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058156
Chromosome:chromosome 8
Location:214768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358555 (1 of 2) PTHR10625//PTHR10625:SF131 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAATAGCACCATGCGCGGCGTTGCTAGCGACAGCCTGCGAGCCAGCC
Internal bar code:GTATTGTCACATGTCAAGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGTGTCCGGGATTTCCA
Suggested primer 2:CTTGCGAGGTGAAGGCAAAC