Insertion junction: CLIP2.058158_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058158
Chromosome:chromosome 2
Location:550450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076850 (1 of 1) PTHR19854:SF1 - GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-LIKE PROTEIN 1 5'UTR
Cre02.g076900 FAP19,CrPKG,CGK2 (1 of 1) PTHR24353:SF32 - PROTEIN PKG-2, ISOFORM C; Flagellar Associated Protein 19 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAACGTCTCGCACAAGTATTGAGCAGAAAGTACTGTCTGCGATTTG
Internal bar code:TTGTGGGGTGACCGGATAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1220
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGATGCAGCTCGGACAAA
Suggested primer 2:CTGTGCACACCCCATTTGTG