Insertion junction: CLIP2.058160_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058160
Chromosome:chromosome 9
Location:2044626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGACCGCCCGCCCCAAGTGTACCGCTGCTTGCGTCAGTCCGCGATG
Internal bar code:TGTATTCGCTGATATATTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2396
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGAGTGACACGTTGGAA
Suggested primer 2:TATCATCGTCGCCATCGTCC