Insertion junction: CLIP2.058165_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058165
Chromosome:chromosome 9
Location:2608333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392250 OTU5 (1 of 2) IPR000104//IPR003323 - Antifreeze protein, type I // OTU domain; OTU-like cysteine protease 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCCGAGACTGGCGCTGGTCCGCGTAGTTGGAAACACCTCCCGGTTC
Internal bar code:GAGCGTCGATTCTATACTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4223
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGTGTGTCAGAAGCAC
Suggested primer 2:ACAGGGTGCACTGAAGACTG