Insertion junction: CLIP2.058175_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058175
Chromosome:chromosome 3
Location:3368104
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTTGCGCCACGCAGGGCGGGAGCTTGGCTGCGCGGCTGCGCTGTCTC
Internal bar code:GAATATGTACTCTTGAATTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3904
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACACGTGTCACAAAAT
Suggested primer 2:GAGGGGGTCTTCCGTTTCAG