Insertion junction: CLIP2.058177_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058177
Chromosome:chromosome 16
Location:2368562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659400 (1 of 1) PTHR23257:SF347 - SERINE/THREONINE-PROTEIN KINASE KINX-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCACTACCTACGGCCATTGCGTATCCTTGATACTCTCGTTTACTTCCT
Internal bar code:TGATAGTAACAGTCTCCATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3260
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCTGGTGAGCGTGTTGT
Suggested primer 2:CCGTCGAGGTGAGGATGATG