Insertion junction: CLIP2.058182_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058182
Chromosome:chromosome 13
Location:80141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801505 (1 of 2) PTHR10642//PTHR10642:SF7 - RIBONUCLEASE H1 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTACACCTTGCCTAACTCCATTCGTCACTTGATGACCCACACACCCA
Internal bar code:ATTTTTCTGGGCTCTTAGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGTCCACAACCGGTAG
Suggested primer 2:GGGCAGCTGCTACAAGTGTA