Insertion junction: CLIP2.058187_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058187
Chromosome:chromosome 17
Location:686951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700550 (1 of 2) IPR000210//IPR008974//IPR011333 - BTB/POZ domain // TRAF-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCCAGACATTATCCCCCGGGAGGAATGTCTAGGAAACGGCCAAAAT
Internal bar code:CCAAGGGTCCGCTACCGCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTGCTGGGAATGAGGT
Suggested primer 2:GCGTGTTAAAGTCGCTGTCC