Insertion junction: CLIP2.058188_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058188
Chromosome:chromosome 12
Location:763023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492500 (1 of 39) IPR009003 - Peptidase S1, PA clan 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTCCTTGGGCAAGGTCGGTAACACGACCTGGGAAGCTTTCTCCAATG
Internal bar code:CTGTGGTCCCTGCAATAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1216
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCATACCGCCCCTCAAAA
Suggested primer 2:CTCGCTGCAATTCCCGATTG