Insertion junction: CLIP2.058188_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058188
Chromosome:chromosome 12
Location:763023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492500 (1 of 39) IPR009003 - Peptidase S1, PA clan 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCACTACTGCCTTCGTGCGGTGCGAGCATGGCGAAGAACCTAGTTA
Internal bar code:CTGTGGTCCCTGCAATAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTGCAATTCCCGATTG
Suggested primer 2:AAGCATACCGCCCCTCAAAA