Insertion junction: CLIP2.058194_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058194
Chromosome:chromosome 11
Location:2160311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467739 IFT54,Traf3ip1,FAP116,Dyf-11Elipsa Intraflagellar Transport Protein 54; (1 of 1) PTHR31363:SF0 - TRAF3-INTERACTING PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGAGAATGGATGGTAATCAACTATAGCGGGCGCTCGTGCAGCGAAGG
Internal bar code:GGCCATAAGGTGGGATTTCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2680
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAGGGTTACTGCAACTA
Suggested primer 2:TAGCATGTCCCCTGCCAAAG