Insertion junction: CLIP2.058196_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058196
Chromosome:chromosome 6
Location:5350412
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g285001 (1 of 1) PTHR34180//PTHR34180:SF1 - FAMILY NOT NAMED // MUTANT TAN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAAACGCATCCTCGACAAAGGATCCCGAGGATTCCGGCTCACAGCCC
Internal bar code:GTCTTATCAGAGCTATACACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1961
LEAP-Seq percent confirming:2.08333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTTGCAACTCTCAGGG
Suggested primer 2:TGAGCACGAAGGAAGGAACC