Insertion junction: CLIP2.058198_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058198
Chromosome:chromosome 10
Location:5030493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454734 TIC21,PIC1 (1 of 1) PTHR21649//PTHR21649:SF13//PTHR34548 - CHLOROPHYLL A/B BINDING PROTEIN // LHCA2 PROTEIN // FAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAAAACCCATGCGTCCCAACCTGTCCCACCTCGCCCACATGCAACT
Internal bar code:CCGCATTAATGGTCCCCTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:636
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCGAGAACGTGGTGGT
Suggested primer 2:GACCTTCAGGCCTCTGCATT